BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032E10LP1|AL429585
(204 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig818 341 3e-94
>3x_Contig818
Length = 3225
Score = 341 bits (171), Expect = 3e-94
Identities = 181/184 (98%), Gaps = 2/184 (1%)
Strand = Plus / Minus
Query: 1 atcacaaatctcagtacgtgaar--tgtgaaagagaccgtagaaaagtcatgggaagatg 58
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 728 atcacaaatctcagtacgtgaaacgtgtgaaagagaccgtagaaaagtcatgggaagatg 669
Query: 59 atatggaagacatggcagacgaagacgaagatgaagaatgataatcgaaattgattagat 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 atatggaagacatggcagacgaagacgaagatgaagaatgataatcgaaattgattagat 609
Query: 119 ccaatttcttaaaccggagtattccttgtgagcgagaagcatccaagtaacacgaaatat 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ccaatttcttaaaccggagtattccttgtgagcgagaagcatccaagtaacacgaaatat 549
Query: 179 atat 182
||||
Sbjct: 548 atat 545
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,069
Number of Sequences: 1807
Number of extensions: 11069
Number of successful extensions: 4853
Number of sequences better than 1.0e-20: 1
length of query: 204
length of database: 10,358,551
effective HSP length: 15
effective length of query: 189
effective length of database: 10,331,446
effective search space: 1952643294
effective search space used: 1952643294
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 49 (98.3 bits)